Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918528.1_cds_XP_016467970.1_60663
CDS Infomation

[gene=LOC107790548] [db_xref=GeneID:107790548] [protein=uncharacterized protein LOC107790548] [protein_id=XP_016467970.1] [location=join(15491..15562,15665..15746,16155..16265,17902..17999,18106..18189,18582..18718,21978..22050,22134..22179,23570..23679,23904..24011,24112..24171,24445..24506,27925..28240,29655..30545)] [gbkey=CDS]
Sequence

ATGGCCACGCTAATCCAACAAACCAAAGGCAATTCCTTGCTGTCGCGCTTCAAGGCCTTT
CTTGCGTTTCAGAAATATAAGCACACGTTTTCTCAAGATAGACGTCGGAGACGGCACCCT
GCTGATATGGGTTCTGACTCTGTGGTCGAGACAGGTGAAATTGACTTCTCAAAGTGGAGG
AAGCTTGACTCAAGGAACTTTGGGATAAGTAGCTCAAGGATACCAGCATCTCCGTGGATT
GTGCTGAAGGTTCTCCAAAGTCAAGGTTTTGAAGCATACCTTGTTGGTGGATGTGTCAGA
GATCTAATTCTCAATAGAATACCAAAAGATTTTGATGTAATCACAACTGCAAGGCTTTCA
CAGATAAGAAGGCATTTTGATCGTGCTGAAATTGTTGGACGACGGTTTCCAATATGTAGA
GTACATGTCAAAGGTTCTGTCGTGGAGGTGTCAAGTTTTGATACCGTGGCAAAGCAAACC
GGAAAAAGAGAGGAACTTTTCATTCCTAAAATGCCAAAGGGATTTTATAAAAAAGACTTC
ATTCTCTGGAAGAATTCCATGCACCGAGACTTCACTGTTAACAGTTTATTTTTCGATCCA
TCCGTGAATAGAATCTACGATTATGCCGATGCAATGGTGGACTTAAAATCCTTACAGTTA
AGGACTTTAATACCAGCACACTTGTCATTTGAACAGGATTGTGCGAGGATGCTGCGCGGC
TTGAGACTGGCTGCTCGCCTTAAGTTGTCCTTTTCAAAGGATATTGAAAATGCTATGCAC
AAACTCTCATCGTCCATAATGAAATTGGACAAGTCTAGACTAATGATGGAAGTCAACTAT
ATGCTGTCTTATGGAGCTGCAGAGCCTTCTCTTTCTTTACTTCAGAGATACAACATCCTT
GAGATGCTACTACCATTTCATGCAGCGCACCTTACTCAACAGTCTAACAAACAATTGGGT
GAAAGTTCTGCTATGCTGATGAAACTATTTTCCAGTTTGGATCAATTAGTCACCTGTGGT
CGACCTTCTCATGATAGTTTGTGGGTTGCACTTTTGGCATTTCATCTGGCATTAATCACT
AAACCTCAACAGGCATTTGTTGTCCTGACGTTTGCTTCTGTGTTGTACCATGGAAATTGG
AAGGAAGGTGTTAAATTTGCTAAAAGACATTCTGATGCTGCAGCTATTTATGCACCTGAA
ATTTCAGATTCTCAAGGCTCCTCCACATCAGATGATGAGCTTGCGGATAGAGTTACAGAG
CTAGCAGTGCTAGTGAAAAATTCTTTAGACATTTTGACTGATAAGGACAGCCTCCGGGAC
GCAATGTCCAAGTTTCCAGGTTCCCCATGCTCTGGTTTGGTATTTGTATCGAAGAAAATG
GGGAAGGGCGTTGAAGTAATTTTTGACATTCTTGTGGAAGATGTTACGTCTCTTAAAACC
AGGAGGAATAGTTTCAAAATAGATTATACTCTGCTTGGGAAAGGACAAATGCGTGAGACA
AGGTTTGTTCTTGGCCAAATCATCCTTGATACTATAGCTCCTGGGATCATTCCAGGTGGT
GAAGTGATTAAAAACGAGAAACATACGCTGGTTAAAGTTGACGCTCAATCGAGTGTAGAT
GATCCAAGGGAAAATATTGGTGGAAATGTGGAGTTAAAGAAGCGGAAGTTCCAGTGTGAA
GATGATAATCAGCCCACTGCAAGTTATGAAATTAAACACAATAGAACTGAGAAGCGAAAG
TTGATTCAAAAGGGGAGCTTTGCTTTAGAGGAGGTAGTAACTAAGAAGCAAAAGTCGGTT
ATTGCCCAGCAATCCAAGAGCAAGGCTGTTGAGAAGCGGGATTTGATTGAATATGACGAA
TCTCTTAATCAGAAGCTAGATAATGAGGATGCTATAAATAAGAAGAAAGCTAAGGGTGAA
CATGGTGAGTTGCCTCAGGATGAAATAAAAATGGTTCTTGAAGGGGCGATGCATAAAGTG
CTGCGTCACAAGATTGAGCAAAAGGGAAGCAATAAACATCAGCAGACTGCCGTAAACCAA
TTAAAGCTTTTACTCGACGTTGACAATGGTGTGACTAGCAAGCAGCACAATTCCAAAGAG
AAGAGTGATTCTTCACAAGAACAGAATGAGGAAAGGAACGAGTCATTAGATAGCAGAAAA
CAGAATTCGCAGGGGCATAATTTGTCTTCGGATAAAAATAGTAAACCAAAAGCAGCAGGT
AAAAGAACACTTTCAAGTCTTTTCAGGTGA

Peptide Sequence

PEP ID

XP_016467970.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107790548 [Nicotiana tabacum]
Sequence

MATLIQQTKGNSLLSRFKAFLAFQKYKHTFSQDRRRRRHPADMGSDSVVETGEIDFSKWR
KLDSRNFGISSSRIPASPWIVLKVLQSQGFEAYLVGGCVRDLILNRIPKDFDVITTARLS
QIRRHFDRAEIVGRRFPICRVHVKGSVVEVSSFDTVAKQTGKREELFIPKMPKGFYKKDF
ILWKNSMHRDFTVNSLFFDPSVNRIYDYADAMVDLKSLQLRTLIPAHLSFEQDCARMLRG
LRLAARLKLSFSKDIENAMHKLSSSIMKLDKSRLMMEVNYMLSYGAAEPSLSLLQRYNIL
EMLLPFHAAHLTQQSNKQLGESSAMLMKLFSSLDQLVTCGRPSHDSLWVALLAFHLALIT
KPQQAFVVLTFASVLYHGNWKEGVKFAKRHSDAAAIYAPEISDSQGSSTSDDELADRVTE
LAVLVKNSLDILTDKDSLRDAMSKFPGSPCSGLVFVSKKMGKGVEVIFDILVEDVTSLKT
RRNSFKIDYTLLGKGQMRETRFVLGQIILDTIAPGIIPGGEVIKNEKHTLVKVDAQSSVD
DPRENIGGNVELKKRKFQCEDDNQPTASYEIKHNRTEKRKLIQKGSFALEEVVTKKQKSV
IAQQSKSKAVEKRDLIEYDESLNQKLDNEDAINKKKAKGEHGELPQDEIKMVLEGAMHKV
LRHKIEQKGSNKHQQTAVNQLKLLLDVDNGVTSKQHNSKEKSDSSQEQNEERNESLDSRK
QNSQGHNLSSDKNSKPKAAGKRTLSSLFR

Transcript Sequence

Gene sequence data has not been registered.